PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_96671g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 367aa    MW: 41095.8 Da    PI: 6.2403
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_96671g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.28.3e-10210256555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                    h+++Er RR++i+++++ L++l+P +     +K   K  iL + ++Y+ksLq
  MA_96671g0010 210 HSIAERARREKIRKRMNYLQDLVPGC-----GKgTGKTVILDEIINYVKSLQ 256
                    9*************************.....5669****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-16203274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.37E-9203260No hitNo description
PROSITE profilePS5088814.564205255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-16206268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-7210256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.9E-9211261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MAAFSHKSPD DNYLLSTGHN CGISDTSLPS RVPKLTFIQP SVDFHTTSPL TVSAASYSLE  60
PQYSYPGTNT VVARETEEYS LQKLDSREID EDIHKLFVET NVFGIDELYS NNIPPDVSMI  120
FDEAIATTDS KEVVEDKRRK NNRVDYRACR INSRMATAIK PCSSSAASTK EKTYKGKQIT  180
ESSPKQSTMP EPAKDFVLVR ARRGQATDRH SIAERARREK IRKRMNYLQD LVPGCGKGTG  240
KTVILDEIIN YVKSLQNQVE FLSMKLSAAS PRYDFSLEPG NHDLGYTEAR PAQEYCGGTV  300
QGSTPDEQLA MVFDPSTDAS CFTFAQESTE ADECDPQLQL HSLVHGRLRQ QDRNHEMAHV  360
LGFSQHH
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1189800.0BT118980.1 Picea glauca clone GQ04012_P10 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5816313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-28bHLH family protein